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Comparative genomics : species tremapath

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SPECIES TREMAPATH ASSOCIATIONS

Instructions relevant to this page:
To view KEGG release 68.0 associations for any of the listed species below, simply click on the View in TremaPath link, then provide an e-value cutoff to recruit alignments to the KEGG defined pathway maps. Mappings are performed using BLAST to align transcripts to the KEGG genes db (the ko annotated only fraction of release 68.0). The KO ids of the subjects hit are used to relate nematode sequences to the KEGG pathway maps. Choosing a less stringent score will be more sensitive, but can introduce false positive mappings.


last update: 08-06-14

Genomes
#Genes
Map view
Clonorchis sinensis
13634
Echinostoma caproni
18607
Fasciola hepatica PRJNA179522
14642
Fasciola hepatica PRJEB6687
33454
Schistosoma curassoni
23546
Schistosoma haematobium
13073
Schistosoma japonicum
12743
Schistosoma mansoni
10831
Schistosoma margrebowiei
26189
Schistosoma mattheei
22997
Schistosoma rodhaini
24089
Trichobilharzia regenti
22202


 
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